2017

  • Thoetkiattikul H, Mhuantong W, Pinyakong O, Wisawapipat W, Yamazoe A, Fujita N, Eurwilaichitr L, Champreda V. “Culture-independent study of bacterial communities in tropical river sediment.” DOI:10.1080/09168451.2016.1234927

2016

  • Linhuan Wu, Qinglan Sun, Philippe Desmeth, Hideaki Sugawara,  Zhenghong Xu,  Kevin McCluskey,  David Smith, Vasilenko Alexander,  Nelson Lima,  Moriya Ohkuma,  Vincent Robert,  Yuguang Zhou,  Jianhui Li, Guomei Fan,  Supawadee Ingsriswang,  Svetlana Ozerskaya, and Juncai Ma “World data centre for microorganisms: an information infrastructure to explore and utilize preserved microbial strains worldwide” doi:  10.1093/nar/gkw903
  • Wipaporn Ngaemthao,  Suwanee Chunhametha, Chanwit Suriyachadkun​ “Planomonospora corallina sp. nov., isolated from soil.” A novel filamentous bacterial strain, A-T 5400T, which developed subglobose sporangia at the end of sporangiophores on substrate mycelia, was isolated from mixed deciduous forest soil collected in Thailand. The taxonomic position of this micro-organism was described using a polyphasic approach. The 16S rRNA gene sequence and phylogenetic analysis indicated that strain A-T 5400T belonged to the genus Actinoplanes and was most closely related to ‘Actinoplanes hulinensis’ NEAU-M9 (98.82 % 16S rRNA gene sequence similarity) and Actinoplanes philippinensis NBRC 13878T (98.75 %). The DNA-DNA relatedness values that distinguished the novel strain from the closest species were below 70 %. The cell-wall peptidoglycan contained meso-diaminopimelic acid. The whole-cell sugars were ribose, galactose, glucose and xylose. The predominant menaquinone was MK-9(H4). The diagnostic phospholipids were phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol. The predominant cellular fatty acids were unsaturated fatty acids C16 : 1, branched fatty acids iso-C16 : 0 and iso-C15 : 0. The G+C content of the genomic DNA was 71 mol%. Following evidence from phenotypic, chemotaxonomic and genotypic studies, the new isolate is proposed to represent a novel species of the genus Actinoplanes named Actinoplanes subglobosus sp. nov. The type strain is A-T 5400T (=BCC 42734T=TBRC 5832T=NBRC 109645T). DOI:10.1099/ijsem.0.001440

2015

  • Duangdao Wichadakul, Noppol KobmooSupawadee IngsriswangSithichoke TangphatsornruangDuriya ChantasinghJanet Jennifer Luangsa-ard and Lily Eurwilaichitr (2015) “Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi ” DOI: 10.1186/s12864-015-2101-4[link]

2013

  • Wu, Linhuan, Qinglan Sun, Hideaki Sugawara, Song Yang, Yuguang Zhou, Kevin McCluskey, Alexander Vasilenko, Ken-Ichiro Suzuki, Moriya Ohkuma, Yeonhee Lee, Vincent Robert, Supawadee Ingsriswang, Franois Guissart, Desmeth Philippe and Juncai Ma (2013) “Global catalogue of microorganisms (gcm): a comprehensive database and information retrieval, analysis, and visualization system for microbial resources.” BMC genomics 14, no. 1 (2013): 933  doi:10.1186/1471-2164-14-933 [link].
  • Robert V, Vu D, Amor ABH, van de Wiele N, Brouwer C, Jabas B, Szoke S, Dridi A, Triki M, Daoud SB, Chouchen O, Vaas L, de Cock A, Stalpers JA, Stalpers D, Verkley GJM, Groenewald M, Santos FBD, Stegehuis G, Li W, Wu L, Zhang R, Ma J, Zhou M, Gorjn SP, Eurwilaichitr L, Ingsriswang S, Hansen K, Schoch C, Robbertse B, Irinyi L, Meyer W, Cardinali G, Hawksworth DL, Taylor JW, Crous PW  “MycoBank gearing up for new horizons.” IMA Fungus 4, no. 2 (2013): 371-379. DOI:10.5598/imafungus.2013.04.02.16 [link].
  • Supawadee Ingsriswang (2013), TBRC: an online networking platform for biological collections in Thailand, Proceedings of the 13th International Conference on Culture Collections (ICCC13) , Beijing, China September 23 – 27, 2013.
  • Supawadee Ingsriswang, Somrak Numnark, Duangdao Wichadakul (2013), Mining information from text and images for biological and chemical data curation. Proceedings of the 5th Asian Network of Research Resource Centers (ANRRC) International Meeting on October 30 – November 1, 2013, Japan.

 

2012

  • Supawadee Ingsriswang (2012), ThaiSciBiodiversity: A national digital resource of integrated biological collections. Proceedings of the 4th Asian Network of Research Resource Centers (ANRRC) International Meeting on October 17  19, Jeju Island, South Korea.
  • Atima Tharatipyakul, Somrak Numnark, Duangdao Wichadakul and Supawadee Ingsriswang (2012), “ChemEx: information extraction system for chemical data curation”, BMC Bioinformatics, 13: (Suppl 17):S9, [link].
  • Somrak Numnark, Wuttichai Mhuantong, Supawadee Ingsriswang and Duangdao Wichadakul (2012), “C-mii: a tool for plant miRNA and target identification”, BMC Genomics, 13: (Suppl 7):S16, [link].
  • Duangdao Wichadakul, Wuttichai Mhuantong, Anan Jongkaewwattana and Supawadee Ingsriswang (2012), “A computational tool for the design of live attenuated virus vaccine based on microRNA-mediated gene silencing”, BMC Genomics, 13: (Suppl 7):S15, [link].

 

2011

  • Supawadee Ingsriswang, Sunai Yokwai and Duangdao Wichadakul (2011), “LinkinPath: From Sequence to Interconnected Pathway”, Bioinformatics 2011, 27: 2015-2017, [link].

2010

  • Natee Saelee, Ichaya Kaewprajob, Samnao Noksiri, Suwanee Chunhametha, Wanchern Potacharoen and Supawadee Ingsriswang (2010), “BRC-DBMS: Database Management System for Biological Resource Centers (2010)”, Proceedings of the International Conference on Culture Collections (ICCC12) : Biological Resource Centers: gateway to biodiversity and services for innovation in biotechnology, Brazil: 46-47.
  • Ichaya Kaewprachuab, Samnao Noksiri, Natee Saelee, Duangdao Wichadakul, Wanchern Potachareon and Supawadee Ingsriswang (2010), “iCollect : A HIGHLY CUSTOMIZABLE MANAGEMENT TOOL FOR BIOLOGICAL RESOURCE CENTERS (BRCS) (2010)”, Proceedings of the International Conference on Culture Collections (ICCC12) : Biological Resource Centers: gateway to biodiversity and services for innovation in biotechnology, Brazil: 94.

 

2009

  • Wuttichai Mhuantong, Supawadee Ingsriswang and Duangdao Wichadakul (2009), “Large scale In silico identification and comparison of miRNAs and targets in diverse plant species”, The Agricultural Biotechnology International Conference (ABIC),22-25 September 2009, bangkok Thailand, (Poster award), [link].
  • Duangdao Wichadakul, Jason McDermott and Ram Samudrala (2009), “Prediction and integration of regulatory and protein-protein interactions”, Methods Mol Biol. (review), 541: 101-43, [link].
  • Wuttichai Mhuanthong and Duangdao Wichadakul (2009), “MicroPC (PC): A comprehensive resource for predicting and comparing plant microRNAs”, BMC Genomic, 10, 1, [link]. Duangdao Wichadakul, Somrak Numnak and Supawadee Ingsriswang (2009), “d-Omix: A Mixer of Generic Protein Domain Analysis Tools”, Nucleic Acids Research, 37(Web Server issue) :W417-21, [link].
  • Duangdao Wichadakul, Somrak Numnak and Supawadee Ingsriswang (2009), “d-Omix: A Mixer of Generic Protein Domain Analysis Tools”, Nucleic Acids Research, 37(Web Server issue) :W417-21, [link].
  • Eakasit Pacharawongsakda, Sunai Yokwai and Supawadee Ingsriswang , “Potential natural product discovery from microbes through a diversity-guided computational framework”, Applied Microbiology and Biotechnology, January 2009, DOI: 10.1007/s00253-008-1847-x. [link]

 

2008

  • Sunai Yokwai, Boonyarat Phadermrod, Eakasit Pacharawongsakda and Supawadee Ingsriswang, Using Molecular Systematics and GIS-based Modeling Approaches for Selection of Potential Sites to Explore the Desirable Microbial Products , Proceedings of SPIE, Geoinformatics 2008, Guangzhou, China, 28-29 June 2008, Vol. 7144, ISBN: 9780819473868 , DOI: 10.1117/12.812850. [link]
  • Wasna Viratyosin, Supawadee Ingsriswang, Eakasit Pacharawongsakda and Prasit Palittapongarnpim,  Genome-wide subcellular localization of putative outer membrane and extracellular proteins in Leptospira interrogans serovar Lai genome using bioinformatics approaches, BMC Genomics 2008, 9:181. [link]
  • Eakasit Pacharawongsakda, Sunai Yokwai, Nitsara Karoonuthaisiri, Duangdao Wichadakul and Supawadee Ingsriswang, œESTplus: an integrative system for comprehensive and customized EST analysis and proteomic data matching , Proceedings of the 2nd International Conference on Bioinformatics and Biomedical Engineering (iCBBE2008: http://www.icbbe.org/), May 16-18, Shanghai, China, pp. 29-32, ISBN: 978-1-4244-1747-6. [link]
  • Duangdao Wichadakul, Supawadee Ingsriswang, Eakasit Pacharawongsakda, Boonyarat Phadermrod and Sunai Yokwai, ATGC-Dom: Alignment, Tree, and Graph for Comparative proteomes by DOMain architecture, Proceedings of the 12th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2008), Mar 30-Apr 2, Singapore (Co-Winner of Poster Special Commendation Award)
  • Boonyarat Phadermrod, Sunai Yokwai, Eakasit Pacharawongsakda and Supawadee Ingsriswang, An Opensource GIS-based Application to Improve the Molecular Systematic Study of Microorganisms in National Parks of Thailand, Proceedings of the 12th Annual Symposium on Computational Science and Engineering (ANSCSE 12 International Symposium), Mar 27-29, Ubon Rajathanee University, Thailand 

 

2007 

  • Juncai Ma, Yuguang Zhou, Xianhua Zhou, Masami Ichihara, Supawadee Ingsriswang, Hiroshi Yokoyama, Hee-Mock Oh, Wanchern Potacharoen, and Ken-ichiro Suzuki (2007) The Strain Database for Asian Biological Resource Center Network, Proceeding of the 11th International Conference on Culture Collections (ICCC11), Goslar, Germany, OCT 7-10, 2007
  • Supawadee Ingsriswang; Eakasit Pacharawongsakda (2007), “sMOL Explorer: an open source, web-enabled database and exploration tool for Small MOLecules datasets”, Bioinformatics, Vol 23(18), September, pp. 2498- 2500. [link]
  • Eakasit Pacharawongsakda and Supawadee Ingsriswang (2007), “Discovering Discriminative Dipeptides in Subcellular Localization of Gram-Negative Bacterial Proteins”, Proceeding of the 4th International Joint Conference on Computer Science and Software Engineering, (JCSSE2007), Khonkaen, Thailand, May 2-4, pp. 343-348
  • Boonyarat Phadermrod ,Sunai Yokwai, Eakasit Pacharawongsakda, Supawadee Ingsriswang, (2007) An Open-source Three-Tier Architecture for Mapping Microbial Diversity NSTDA Annual Conference, (NAC 2007), Pathumthani, Thailand, March 28-30

 

2006

  • Supawadee Ingsriswang , Natee Saelee and Sunai Yokwai (2006) CC-Share: Deploying Information-Sharing Services on Various Networks of Culture Collections, Proceeding of the 20thCODATA International Conference, (CODATA 2006), Beijing, China, Oct 23-25
  • Siriwon Taewijit, Eakasit Pacharawongsakda and Supawadee Ingsriswang (2006), Improved Subcellular Localization Prediction of Gram-positive Bacterial Proteins Using Feature Selection and DDAG Support Vector Machines, Proceeding of the 10th National Computer Science and Engineering Conference, (NCSEC 2006), Khonkaen, Thailand, Oct 25-27, pp. 535-543
  • Eakasit Pacharawongsakda and Supawadee Ingsriswang (2006), NAT : An Open Source Platform for Searchable Structure and Property Database of Natural Bioactive Compounds, Proceeding of the 10th National Computer Science and Engineering Conference,(NCSEC 2006), Khonkaen, Thailand, Oct 25-27, pp. 544-552
  • Sunai Yokwai, Boonyarat Phadermrod, Supawadee Ingsriswang, (2006) Integrated Microbial Data Network using Ontology-based Mediator Architecture Proceeding of the 10th National Computer Science and Engineering Conference, (NCSEC 2006), Khonkaen, Thailand, Oct 25-27, pp. 553-560
  • Eakasit Pacharawongsakda and Supawadee Ingsriswang (2006), AAA: Automatic AIDS Antiviral Screening System Using SVM with Maximal Frequent Molecular Fragments, Proceeding of the 10th Annual National Symposium on Computational Science and Engineering (ANSCSE10), Chiangmai, Thailand, March 22-24, pp. 171-175, ISBN: 974-656-924-4
  • Piroon Jenjaroenpun, Pravech Ajawatanawong, Taweerat Vichitsoonthonkul, Supawadee Ingsriswang and Prasit Palittapongarnpim(2006), Detection of Leucine-Rich Repeat Region in Proteins, Proceeding of the 10th Annual National Symposium on Computational Science and Engineering (ANSCSE10), Chiangmai, Thailand, March 22-24 ,pp. 536-540, ISBN: 974-656-924-4
  • Siriphan Manocheewa, Taweerat Vichitsoonthonkul, Pravech Ajawatanawong, and Supawadee Ingsriswang (2006), Combination Approach for Predicting Prokaryotic Sigma Factor Binding Sites, Proceeding of the 10th Annual National Symposium on Computational Science and Engineering (ANSCSE10), Chiangmai, Thailand, March 22-24 ,pp. 518-523, ISBN: 974-656-924-4
  • Supawadee Ingsriswang and Wanchern Potachareon (2006), Proposed Integration Model for ACM data Network, the First Working Group Meeting on the ACM Data Network, KRIBB, Daejon city, Korea, February 27-28, 2006

 

2005

  • Eakasit Pacharawongsakda and Supawadee Ingsriswang (2005), Subcellular Localization Prediction of Gram-negative Bacterial Proteins Using Decision Directed Acyclic Graph Support Vector Machines, Proceeding of the 9th National Computer Science and Engineering Conference, Bangkok (NCSEC 2005), Thailand, 27-28 October 2005, pp.161-170, ISBN-974-677-541-3
  • S. Ingsriswang and W. Potachareon (2005), Bioresource Information Management: a perspective from Thailand, Oral Presentation at the ACM Workshop, BIOThailand 2005, Queen Sirikrit Convention Center, Bangkok, Thailand, 2-5 NOV 2005
  • Supawadee Ingsriswang, and Eakasit Pacharawongsakda (2005), Feature Selection and Prediction of Protein Subcellular Locations for Gram-Negative Bacteria , Technical Report, Information Systems Laboratory, BIOTEC Central Research Unit
  • Watwiboon Praemongkol, Duangdao Wichadakul and Supawadee Ingsriswang (2005), Promoter-ID: A Promoter Identification Tool Utilizing Consensus of Promoter Prediction Programs , Biothailand 2005, Queen Sirikrit Convention Center, Bangkok, Thailand, 2-5 NOV 2005
  • S. Ingsriswang, W. Viratyosin, E.Pacharawongsakda, P. Palittapongarnpim, “Post-Prediction through Hierarchical Partitioning and Discriminant Analysis for Decision Support of Putative Secreted Protein Identification”, Poster Presentation at the Third Asia-Pacific Bioinformatics Conference (APBC2005), Singapore, 17-21 January 2005
  • P. Ajawatanawong, S. Ingsriswang, P. Awachai, W. Wongkia, P. Palittapongarnpim, “Periodicity and Pattern Discovery of Leptospira interrogans Leucine-rich Repeat (LiLRR)”, Poster Presentation at the Third Asia-Pacific Bioinformatics Conference (APBC2005), Singapore, 17-21 January 2005
  • W. Viratyosin, S. Ingsriswang, E.Pacharawongsakda, P. Palittapongarnpim, “Computational Framework Analysis for Secreted Proteins in Leptospira interrogans Genome”, Poster Presentation at of the Third Asia-Pacific Bioinformatics Conference (APBC2005), Singapore, 17-21 January 2005
  • G. A. Forgionne and S. Ingsriswang, An Overview of Stickiness: Implications for Web-Based Customer Loyalty Efforts ,Encyclopedia of Information Science and Technology, Idea Group Publishing, PA, USA, January 2005,ISBN 1-59140-553-X

 

2004

  • P. Ajawatanawong, P. Awachai, W. Wongkia, S. Ingsriswang, B. Wiwatpatapee, P. Palittapongarnpim, “Fourier Spectra of Leucine in Leptospiral Leucine-rich Repeat (LiLRR) Protein Sequences”, Proceedings of the 1st Thailand Computer Science conference ( ThCSC 2004 ) , Department of Computer Science, Kasetsart University, THAILAND, 16 – 17 December 2004
  • P. Liu, J. Jing, P. Luenam, Y. Wang, L. Li, S. Ingsriswang, The Design and Implementation of a Self-Healing Database System.,Journal of Intelligent Information Systems,Volume 23, Issue 3, Nov 2004, Pages: 247-269
  • E. Pacharawongsakda, S. Ingsriswang, A. Nathalang and W. Brockelman, Mo-Singto: A Mobile Integrated Data Logging and Mapping System for Study of Forest Regeneration, Proceedings of the IUFRO4.11 Conference on Applications of Statistics, Information Systems and Computers in Natural Resources Monitoring and Management, Taiwan, June 7-11, 2004.
  • P. Ajawatanawong, S. Ingsriswang, P. Chitnumsub, and P. Palittapongarnpim, In Silico Characterization of Leucine-Rich Repeat (LRR) Motif from Leptospira interrogans genomes: a homology modeling approach, Proceedings of the International Conference on Bioinformatics (InCoB) 2004, 5-8 Sept.,2004, Auckland, New ZeaLand
  • P. Jirapinyo, P. Ajawatanawong, S. Ingsriswang, and P. Palittapongarnpim, Evolutionary analysis of molybdate binding domain of ModE (molybdate metabolism regulator) from Leptospira interrogans ,Proceedings of the International Conference on Bioinformatics (InCoB) 2004, 5-8 Sept.,2004, Auckland, New ZeaLand
  • S. Ingsriswang, S. Yokwai, C. Sriwiroj, W. Potachareon (2004). GSM: A web-based phylogenetic pipeline and database management system for microbial identification, Proceedings of the Tenth International Congress for Culture Collections Tsukuba, Japan, 10-15 October, 472-473

 

2003 

  • S. Mayteeworakoon, S. Ingsriswang and M. Tanticharoen, Searching for the Optimum Response Region of pH and Temperature Conditions for the Production of a Newly Commercialized Parasol Mushroom, Macrolepiota glacilenta (Hed Nok Yoong) by Response Surface Methodology, Poster Presentation in BioThailand 2003, Pattaya