.......The Prediction utility helps to predict whether an input nucleotide sequence (< 3000 bp) is a potential miRNA candidate, and to scan for EST sequences of a plant species potentially targeted by an input mature miRNA sequence (in range of 18-26 nt). The miRNA Scanner provides interactive steps for predicting miRNA candidates. Users could reduce the number of hit mature miRNAs from miRBase via E-value and maximum number of alignments setting. The Target Scanner allows flexible criteria where users may reduce the number of possible targets via numbers of allowed mismatches and G:U pairs.
Please input a mature miRNA sequence to search for its targets against plant EST sequences from PlantGDB
